Proteopedia

Proteopedia

Proteopedia logo

Proteopedia is an interactive, collaborative 3D encyclopedia of proteins, RNA, DNA, and other molecules. It is designed to help students, educators, and researchers visualize and understand the complex structures of biomolecules. Proteopedia is a web-based resource that integrates text with three-dimensional molecular structures, allowing users to explore and manipulate these structures in real-time.

Features

Proteopedia provides a unique platform where users can interact with molecular structures using a web browser. The main features of Proteopedia include:

• Interactive 3D Visualization: Users can rotate, zoom, and explore molecular structures in three dimensions. This is facilitated by the Jmol applet, which is embedded in the pages.
• Green Links: These are hyperlinks that, when clicked, change the view of the 3D structure to highlight specific features or regions of interest.
• Collaborative Editing: Similar to Wikipedia, Proteopedia allows registered users to edit and contribute content, making it a collaborative platform for sharing knowledge about molecular structures.
• Scene Authoring Tools: Users can create "scenes" that capture specific views and annotations of molecular structures, which can be saved and shared with others.

Educational Use

Proteopedia is widely used in biochemistry, molecular biology, and structural biology education. It provides a valuable resource for teaching complex concepts related to the structure and function of biomolecules. Educators can create custom pages and scenes tailored to their curriculum, enhancing the learning experience for students.

Community and Collaboration

Proteopedia is maintained by a community of scientists and educators who contribute to its content and development. The platform encourages collaboration and sharing of knowledge, making it a dynamic and up-to-date resource for the scientific community.

Related pages

• Jmol
• Molecular visualization
• Structural biology
• Biochemistry